Decision Workspace
rust_deseq2 vs piscem vs gtf_splice_index
Side-by-side comparison of Rust crates
37
rust_deseq2
experimentalv0.1.0
A pure Rust implementation of DESeq2 for differential expression analysis of RNA-seq data
51
piscem
experimentalv0.21.1
Fast, space-efficient k-mer-based read mapper for bulk RNA-seq, scRNA-seq, and scATAC-seq
50
gtf_splice_index
experimentalv0.4.2
A fast, splice-aware index for GTF/GFF annotations enabling efficient transcript and gene lookup for RNA-seq read mapping and quantification.
Core Metrics
| rust_deseq2 | piscem | gtf_splice_index | |
|---|---|---|---|
| Health Score | 37 | 51 | 50 |
| Total Downloads | 227 | 153 | 247 |
| 30d Downloads | 0 | 0 | 0 |
| Dependents | 0 | 0 | 3 |
| Releases | 1 | 8 | 2 |
| Last Updated | 163d ago | 4d ago | 75d ago |
| Age | 5m | 4m | 4m |
Health Breakdown
rust_deseq2
Maintenance
6
Quality
10
Community
6
Popularity
3
Documentation
12
piscem
Maintenance
20
Quality
12
Community
6
Popularity
3
Documentation
10
gtf_splice_index
Maintenance
13
Quality
13
Community
8
Popularity
3
Documentation
13
Technical Details
| rust_deseq2 | piscem | gtf_splice_index | |
|---|---|---|---|
| Version | 0.1.0 | 0.21.1 | 0.4.2 |
| Stable (≥1.0) | ✗ No | ✗ No | ✗ No |
| License | MIT | BSD-3-Clause | MIT |
| Dependencies | 17 | 11 | 6 |
| Crate Size | 153KB | 50KB | 34KB |
| Features | 0 | 0 | 0 |
| Yanked % | 0.0% | 0.0% | 0.0% |
| Edition | 2021 | 2024 | 2024 |
| MSRV | 1.70 | — | — |
| Owners | 1 | 1 | 1 |
Links
Quick Verdict
- •piscem leads with a health score of 51/100, but none of the options score above 80.
- •gtf_splice_index has the most downloads (247), suggesting wider adoption.