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bismark

v3.1.0 Experimental

The Bismark bisulfite-sequencing suite (Rust) — the bismark aligner, deduplicate_bismark, bismark_methylation_extractor, bismark2bedGraph, coverage2cytosine, bismark_genome_preparation, bam2nuc, NOMe_filtering, filter_non_conversion, methylation_consistency, bismark2report, bismark2summary, all in one crate.

GPL-3.0-only Edition 2024 MSRV 1.89
Command line utilitiesScience::Bioinformatics #bioinformatics#sequencing#methylation#bisulfite#bismark

Quick Verdict

  • Actively maintained (updated 0d ago)
  • !Heavy dependency tree (27 direct deps)

Security

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Downloads
38
Dependents
0
Releases
2
Size
5.8MB

Deep Insights

📊
Download activity

38 downloads in the last 30 days (1/day avg).

📦
Heavy dependency tree

27 direct dependencies. Consider the impact on compile times and supply chain complexity.

📐
Large crate size

5.8MB is relatively large. May impact download and compile times.

Health Breakdown

Maintenance 14/25

Recency, release consistency, active ratio

Quality 10/25

Yanked ratio, deps, size, maturity, features

Community 8/20

Reverse deps, ownership, ecosystem

Popularity 2/15

Downloads, momentum, growth trend

Documentation 12/15

Docs, repo, license, metadata

Download Trend

Daily downloads · last 90 days
0/day avg
04/265/146/16/197/77/24

Version Adoption

v3.0.0
63%
v3.1.0
37%

Release Timeline

2 releasessince 2026
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Feature Flags

binseq-inputrammap-inprocess

README

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Maintainers

Dependencies
27
direct dependencies
Dependents
0
crates depend on bismark

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