bismark

Experimental

The Bismark bisulfite-sequencing suite (Rust) — the bismark aligner, deduplicate_bismark, bismark_methylation_extractor, bismark2bedGraph, coverage2cytosine, bismark_genome_preparation, bam2nuc, NOMe_filtering, filter_non_conversion, methylation_consistency, bismark2report, bismark2summary, all in one crate.

Command line utilities Science::Bioinformatics

GitHub ↗ crates.io ↗ Compare with…

Quick Verdict

✓Actively maintained (updated 0d ago)
!Pre-1.0: API may have breaking changes
✓Tiny footprint (0B, 0 deps)

Security

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Downloads

Dependents

Releases

Size

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Deep Insights

🪶

Zero dependencies

bismark has no external dependencies — minimal supply chain risk and fast compile times.

Health Breakdown

Maintenance 0/25

Recency, release consistency, active ratio

Quality 0/25

Yanked ratio, deps, size, maturity, features

Community 0/20

Reverse deps, ownership, ecosystem

Popularity 0/15

Downloads, momentum, growth trend

Documentation 0/15

Docs, repo, license, metadata

Download Trend

Daily downloads · last 90 days

0/day avg

Version Adoption

v3.1.0

60%

v3.0.0

40%

Release Timeline

2 releasessince 2026

2026

Less

Feature Flags

binseq-inputrammap-inprocess

README

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Dependencies

direct dependencies

Dependents

crates depend on bismark